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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015876976.1_cds_XP_016436332.1_32203
CDS Infomation

[gene=LOC107762480] [db_xref=GeneID:107762480] [protein=probable beta-1,4-xylosyltransferase IRX9] [protein_id=XP_016436332.1] [location=join(80806..81614,82949..83177,84538..84651)] [gbkey=CDS]
Sequence

ATGGTGTCTATAGAAAGATCAAAGAAAAAAGTGCAACTATGGAAGAAAGCAATTGTTCAT
TTTCTTCTTTGTTTTGTTATGGGATTTTTCACTGGCTTTGCTCCAACAGGCAAAGGTTCA
TTGTTTTCCACTAGGAATAGTGCTATTCCTAAAATTACTCAATCAAATCAAACACAACCA
AATATGTTGTACCATTCAAGATTAGAAAGTGAGACTTTCAATAAACCTTTATTAGACGAA
ACAACAACAACAATAGCAACGACAACAATAGCATCAGAATGGTCTAACTTAAACGATACG
AGACATTCAGAAAAGGTCTTAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA
GAAGAAGAAGAAGGAGAAGAGCGACATGAACAAGAACAGAATCAGGATCAAGATCAAGAT
CAAGAACGAGAAGAAGCAAATGGAGAGTTCTTGAATCCGAGAAGGCTACTAATTATTGTC
ACTCCAACGAGCGCGAAAGATCAAAATAGAGGAATGCTACTAAGGAGATTATCAAACACA
TTGAGATTAATTCCACAACCAATTTTATGGGTGGTTGTGGAGCAACAAAATGAGGATTCA
AATGTATCAGAAATACTTAGGAAAACAGGAATTATGTATAGACACTTGGTTTTTAAGGAG
AATTTCACAAATATACATGAAGAAGTGGATCATCAAAGAAATGTGGCTCTTAATCACATT
GAACATCACAAGTTAAGTGGGATTGTTCATTTTGCTAGCCTATCAAATGTCTATGATCTC
AGTTTCTTTGATCAACTTCGAGCAATTGAGGGATTTGGGACATGGCCAATGGCATTATTA
TCTGCAAACAAGAAGGAAGTGATAATAGAGGGACCAGTTTGTGATTCATCTGAAGTTATG
GGGTGGCATTTGAAGAAAGCAAATAATTCAACAGATGAAAGGCCTCCAATTAGAGTTTCA
AGTGTTGCTTTTAACAGTTCAATTCTTTGGGATCCAGAAAGATGGGGTCGCACTTCTTCT
ATTCAAGACACTTCTCAGGATTCTCTGAAATTTGTGAGAAAGGAAGTTCTTGAAGACGAA
ACTAAATTGATGGGAATTCCTCCAAATGATTGCTCCAAAATTTTGCTATGGAATCTCCCA
CTTTCAACATGA

Peptide Sequence

PEP ID

XP_016436332.1
PEP Infomation

PREDICTED: probable beta-1,4-xylosyltransferase IRX9 [Nicotiana tabacum]
Sequence

MVSIERSKKKVQLWKKAIVHFLLCFVMGFFTGFAPTGKGSLFSTRNSAIPKITQSNQTQP
NMLYHSRLESETFNKPLLDETTTTIATTTIASEWSNLNDTRHSEKVLEEEEEEEEEEEEE
EEEEGEERHEQEQNQDQDQDQEREEANGEFLNPRRLLIIVTPTSAKDQNRGMLLRRLSNT
LRLIPQPILWVVVEQQNEDSNVSEILRKTGIMYRHLVFKENFTNIHEEVDHQRNVALNHI
EHHKLSGIVHFASLSNVYDLSFFDQLRAIEGFGTWPMALLSANKKEVIIEGPVCDSSEVM
GWHLKKANNSTDERPPIRVSSVAFNSSILWDPERWGRTSSIQDTSQDSLKFVRKEVLEDE
TKLMGIPPNDCSKILLWNLPLST

Transcript Sequence

Gene sequence data has not been registered.